April 20, 2016
| Feature | Nodule | Endo |
|---|---|---|
| Platform | MiSeq | MiSeq + HiSeq |
| Read length | 300 | 300 |
| Samples | 18 | 10 |
| Raw | 8.32 Gbp | 191.6 Gbp |
| QC | 4.16 Gbp | 47.2 Gbp |
| Gbp sample | 0.23 | 4.72 |
| Feature | Nodule | Endo |
|---|---|---|
| assembler | megahit | SPAdes |
| % mapped | 99.65 | |
| properly paired | 78.16 | |
| N50 | 10,631 | 1,652 |
| Average cov | 1.6 | |
| # essential genes | 5,769 | |
| Nodes | 133,461 | |
| Edges | 152,761 |
| Bin Id | Marker Lineage | Completeness | Contamination |
|---|---|---|---|
| bin.3 | f__Paenibacillaceae | 99.85 | 0.02 |
| bin.8 | o__Actinomycetales | 99.81 | 0 |
| bin.7 | f__Moraxellaceae | 99.51 | 0.82 |
| bin.9 | f__Moraxellaceae | 99.45 | 0.14 |
| bin.4 | g__Burkholderia | 98.46 | 0.57 |
| bin.10 | o__Bacillales | 97.80 | 1.34 |

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